Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARRGPGWRPLLLLVLLAGAAQGGLYFRRGQTCYRPLRGDGLAPLGRSTYPRPHEYLSPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN-AGSCEGGNDLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAE-YQDT-TYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAIEEHCTFGDPIV |
| 2B1M Chain:A ((2-224)) | -------------------------------------------------------------APESWDWSKK---GVITKVKFQG---QCGSGWAFSATGAIEAAHAIATGN---LVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHGGIASEADYPYKARDGKCKAN-----E--IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA-KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGN----LLGVCGMNYFASYPII-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90151 for 1906 contacts (-47.3/contact) +
2D Compatibility (PS) -23767 + (NN) -10787 + (LL) 2948
1D Compatibility (HY) -9200 + (ID) 3350
Total energy: -134307.0 ( -70.47 by residue)
QMean score : 0.404
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