Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
3OZF Chain:A ((20-247))
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKA---
General information:
TITO was launched using:
RESULT:
Template:
3OZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201383 for 1835 contacts (-109.7/contact) +
2D Compatibility (PS) -24419 + (NN) -11031 + (LL) 200
1D Compatibility (HY) -37200 + (ID) 11400
Total energy: -285233.0 ( -155.44 by residue)
QMean score : 0.845
(partial model without unconserved sides chains):
PDB file :
Tito_3OZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZF-query.scw
PDB file :
Tito_Scwrl_3OZF.pdb
: