Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
3GAL Chain:B ((1-135))
-SNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
General information:
TITO was launched using:
RESULT:
Template:
3GAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79855 for 1019 contacts (-78.4/contact) +
2D Compatibility (PS) -14242 + (NN) -5088 + (LL) 208
1D Compatibility (HY) -17200 + (ID) 6750
Total energy: -122927.0 ( -120.63 by residue)
QMean score : 0.718
(partial model without unconserved sides chains):
PDB file :
Tito_3GAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GAL-query.scw
PDB file :
Tito_Scwrl_3GAL.pdb
: