Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNASLLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKV-----LTLDHPDAVKLFTRQLLELHQGQGLDIYWRDNYTCP--TEEEYKAMVLQKTGGLFGLAVGLMQLFSDY-KEDLKPLLNTLGLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRP------ESTQVQNILRQRTENIDIKKYCVHYLEDV-GSFEYTRNTLKELEAKAYKQIDARGGNPELVALVKHLSKMFKEENE |
| 2E8X Chain:B ((4-340)) | NKMEAKIDELINNDPVWSSQNESLISKPYNHILLKPGKNFRLNLIVQINRVMNLPKDQLAIVSQIVELLHNSSLLIDDIEDNAPLRRGQTTSHLIFGVPSTINTANYMYFRAMQLVSQLTTKEPLYHNLITIFNEELINLHRGQGLDIYWRDFLPEIIPTQEMYLNMVMNKTGGLFRLTLRLMEALSPSHGHSLVPFINLLGIIYQIRDDYLNLKDFQ----MSFAEDITEGKLSFPIVHALNFTKTKGQTEQHNEILRILLLRTSDKDIKLKLIQILEFDTNSLAYTKNFINQ-LVNMIKNDNENKYLPELLYIIDHLSEL------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2E8X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -94982 for 2189 contacts (-43.4/contact) +
2D Compatibility (PS) -30559 + (NN) -11324 + (LL) 692
1D Compatibility (HY) -26800 + (ID) 5950
Total energy: -168923.0 ( -77.17 by residue)
QMean score : 0.428
|
|
|