Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
2F21 Chain:A ((1-162))
MADEEKLPPGWEKRMS-ADGRVYYFNHITNASQWERPSG---------QGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
General information:
TITO was launched using:
RESULT:
Template:
2F21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21512 for 1149 contacts (-18.7/contact) +
2D Compatibility (PS) -16387 + (NN) -11199 + (LL) -596
1D Compatibility (HY) -16000 + (ID) 7550
Total energy: -73244.0 ( -63.75 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_2F21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F21-query.scw
PDB file :
Tito_Scwrl_2F21.pdb
: