Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVIFSEDHKLRNAKTELYGGELVPPFEAPFRAEWILAAVKEAGFDDVVAPARHGLETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNAAETAISPGTWEAALSSMASAIDGADLIAAGHKAAFSLCRPPGHHAGIDMFGGYCFINNAAVAAQRLLDK-GAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHG-DPAEAFPHFLGYAEETGKGAGAGTTANY--------PMGRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGVDTFEQDPISF--FKLTSP--DYITMGRTIAASGVPLLVVMEGGYGVPEIGLNVANVLKGVAG |
| 2VQO Chain:A ((147-337)) | --------------------------------------------------------------------------------------------------------------------------------------------------KNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGS-GAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAF---RTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTK-QLMGLAGGRIVLALEGGYDLTAI------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85750 for 1415 contacts (-60.6/contact) +
2D Compatibility (PS) -19359 + (NN) -7980 + (LL) 10536
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -117803.0 ( -83.25 by residue)
QMean score : 0.203
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