Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG
1Z5P Chain:A ((11-242))
MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHCKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSSLMVESLVQKLAHG
General information:
TITO was launched using:
RESULT:
Template:
1Z5P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -192683 for 2000 contacts (-96.3/contact) +
2D Compatibility (PS) -25592 + (NN) -19119 + (LL) 0
1D Compatibility (HY) -33200 + (ID) 11600
Total energy: -282194.0 ( -141.10 by residue)
QMean score : 0.801
(partial model without unconserved sides chains):
PDB file :
Tito_1Z5P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z5P-query.scw
PDB file :
Tito_Scwrl_1Z5P.pdb
: