Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
3BL6 Chain:A ((3-230))
MIGIIGAMEEEVTILKNKLTQLSEISVAHVKFYTGILKDREVVITQSGIGKVNAAISTTLLINKFKPDVIINTGSAGALDESLNVGDVLISDDVKYHDADATAFGYEYGQIPQMPVAFQSSKPLIEKVSQVVQQQQLTAKVGLIVSGDSFIGSVEQRQKIKKAFPNAMAVEMEATAIAQTCYQFNVPFVVVRAVSDLANGEAEMSFEAFLEKAAVSSSQTVEALVSQL
General information:
TITO was launched using:
RESULT:
Template:
3BL6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139942 for 2058 contacts (-68.0/contact) +
2D Compatibility (PS) -24944 + (NN) -11430 + (LL) 0
1D Compatibility (HY) -33200 + (ID) 11400
Total energy: -220916.0 ( -107.34 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_3BL6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BL6-query.scw
PDB file :
Tito_Scwrl_3BL6.pdb
: