Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPD----DGSGK----SYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
2OS3 Chain:A ((12-198))
LITMDDIIREGNPTLRAVAKEVSLPLCDEDILLGEKMMQFLKHSQDPVMAEKLGLRAGVGLAAPQIDVSKRIIAVLVPNLPDKEGNPPKEAYSWQEVLYNPKIVSHSVQDAALSDGEGCLSVDRVVEGYVVRHARVTVDYYDKEGQQHRIKLKGYNAIVVQHEIDHINGVLFYDRINAKNPFETKEE----
General information:
TITO was launched using:
RESULT:
Template:
2OS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77037 for 1365 contacts (-56.4/contact) +
2D Compatibility (PS) -18789 + (NN) -3849 + (LL) 632
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -122743.0 ( -89.92 by residue)
QMean score : 0.802
(partial model without unconserved sides chains):
PDB file :
Tito_2OS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS3-query.scw
PDB file :
Tito_Scwrl_2OS3.pdb
: