Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHAGRTGYDNREIVMKYIHYKLSQRGYEWDAGDVGAAPPGAAPAPGIFSSQPGHTPHPAASRDPVARTSPLQTPAAPGAAAGPALSPVPPVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGPSMRPLFDFSWLSLKTLLSLALVGACITLGAYLGHK
4LXD Chain:A ((6-163))
-----RTGYDNREIVMKYIHYKLSQRGYEWDAG--------------------------------------------------------SEVVHLTLRQAGDDFSRRYRRDFAEMSSQLHLTPFTARGRFATVVEELFRDGVNWGRIVAFFEFGGVMCVESVNREMSPLVDNIALWMTEYLNRHLHTWIQDNGGWDAFVELYGP-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4LXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106688 for 1003 contacts (-106.4/contact) +
2D Compatibility (PS) -15200 + (NN) -4557 + (LL) 3908
1D Compatibility (HY) -22000 + (ID) 7050
Total energy: -151587.0 ( -151.13 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_4LXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LXD-query.scw
PDB file :
Tito_Scwrl_4LXD.pdb
: