Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSHMLEMRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
1H48 Chain:E ((2-158))
-----EMRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIK---
General information:
TITO was launched using:
RESULT:
Template:
1H48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116304 for 1314 contacts (-88.5/contact) +
2D Compatibility (PS) -17593 + (NN) -10566 + (LL) 488
1D Compatibility (HY) -21200 + (ID) 7850
Total energy: -173025.0 ( -131.68 by residue)
QMean score : 0.812
(partial model without unconserved sides chains):
PDB file :
Tito_1H48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H48-query.scw
PDB file :
Tito_Scwrl_1H48.pdb
: