Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVL---LESGEKSTKSVSTSYVLEK--------------SLSDPSTD----------FDKI------------HSTVRSLRSEFKHEKSWRR---QKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNVCDKCKISEEMSNFLAWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC |
4IAR Chain:A ((17-398)) | -------------------LPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQA-----SECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEAR--------SRIADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLAARERKATKTLGIILGAFIVCWLPFFIISLVMPI----WFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232923 for 2333 contacts (-99.8/contact) +
2D Compatibility (PS) -33757 + (NN) -4453 + (LL) 1872
1D Compatibility (HY) -42000 + (ID) 8900
Total energy: -320161.0 ( -137.23 by residue)
QMean score : 0.342
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