Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASLSQLSSHLNYTCGAENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRIC--CDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDP--------------TVCSISNPDFVIYSSVVSFY----LPFGVTVLVYARIYVVLKQR-------------------------RRKRILTRQNSQCNSVRPGFPQQTLSPDPAHLELKRYYSICQDTALGGPGFQERGGELKREEKTRNSLSPTIAPKLSLEVRKLSNGRLSTSLKLGPLQPRGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSP--ELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC |
| 4EIY Chain:A ((24-424)) | ---------------------GAPPIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS-TG----FCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRY---NGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK---------------MKDFRH----------GFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLE----RARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIV-LSHTNSVVNPFIYAYRIREFRQTFRKIIRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196166 for 2518 contacts (-77.9/contact) +
2D Compatibility (PS) -34873 + (NN) -11336 + (LL) 2112
1D Compatibility (HY) -26400 + (ID) 5200
Total energy: -271863.0 ( -107.97 by residue)
QMean score : 0.299
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