Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWNATPSEEPGFNLTLADLDWDASPGNDSLGDELLQLFPAPLLAGVTATCVALFVVGIAGNLLTMLVVSR-FRELRTTTNLYLSSMAFSDLLIFLC-MPLDLVR-LWQYRPWNFGDLLCKLFQFVSESCTYATVLTITALSVERYFAICFPLRAKVVVTKGRVKLVIFVIWAVAFCSAGPIFVLVGVEHE--NGTDPWDTNECRPTEFAVRSGLLTVMVWVSSIFFFL-PVFCLTVLYSLIGRKLWRRRRGDAVVGASLRDQNHKQTVKMLAVVVFAFILCWLPFHVGRYLFSK-SFEPGSLEIAQISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAVFRLLGFEPFSQRKLSTLKDESSRAWTESSINT |
| 4XEE Chain:A ((35-345)) | ---------------------------------------------VTAIYLALFVVGTVGNSVTLFTLARK-----STVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVERYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSADGTHPGGL-VCTPI---VDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMV--------PGRVQALRHGVLVLRAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALFYASSAINPILYNLVSANFRQVFLSTLNIFEMLRIDEGLRLKIYKDTEGYYTIGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XEE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245597 for 2002 contacts (-122.7/contact) +
2D Compatibility (PS) -27281 + (NN) -10035 + (LL) 2796
1D Compatibility (HY) -31200 + (ID) 5400
Total energy: -316717.0 ( -158.20 by residue)
QMean score : 0.370
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