Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANSASPEQNQNHCSAINNSIPLMQGNLPTLTLSGKIRVTVTFF-LFLLSATFNASFLLKLQKWTQKKEKGKKLSRMKLLLKHLTLANLLETLIVMPLDGMWNITVQ--WYAGELLCKVLSYLKLFSMYAPAFMMVVISLDRSLAITRPLALKSNSKVGQSMVGLAWILSSVFAGPQLYIFRMIHLADSSGQTKVFSQCVTHCSFSQWWHQAFYNFFTFSCLFIIPLFIMLICNAKIIFTLTRVLHQDPHELQLNQSKNNIPRARLKTLKMTVAFATSFTVCWTPYYV--LGIWYWFDPEMLNRLSDPVNHFFFL---FAFLNPCFDPLIYGYFSL |
4BV0 Chain:A ((19-312)) | -----------------------------------KVLVTAIYLALFVVGTVGNGVTLFTLAR---K-------SRVDYYLGSLALSDLLILLFALPVDVYNFIWVHHPWAFGDAGCKGYYFLREACTYATALNVVSLSVELYLAIRHP--LMSRSRT-KKFISAIWLASALLAIPMLF---TVGLQNLSGDGTHPGGLVCTPIVDTATLKVVIQLNTFMS-FLFPMLVASILNTVIARRLTVMVH-----------PGRVQALRRGVLVLR-AMVIAFVVCWLPYHVRRLMFVYISDEQWTTALFDFYHYFYMLSNALVYVSAAINPILYNLVSA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -219363 for 1914 contacts (-114.6/contact) +
2D Compatibility (PS) -26422 + (NN) -7475 + (LL) 3424
1D Compatibility (HY) -26400 + (ID) 3850
Total energy: -280086.0 ( -146.34 by residue)
QMean score : 0.251
|
|
|