Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGHNTSRNSSCDPIVTPHLISLYFIVLIGGLVGVISILFLLV-KMNTRSVTTMAVINLVVVHSVFLLTVPFRLTYLIKKT-WMFGLPFCKFVSAMLHIHMYLTFLFYVVILVTRYLIFFKCKDKVEFYRKLHAVAASAGMWTLVIVIVVPLVVSRYGIHEEYNEEHCF-KFHKELAYTYVKIINYMIVI-FVIAVAVILLVFQVFIIMLMVQKLRHSL---------------------------------LSHQEFW-----AQLKNLFFIGVILVCFL----PYQFFRIYYLNVVT-----HSNACNSKVAFYNEIFLSVTAISCYDLLLFVFGGSHWFKQKIIGLWNCVLCR |
| 4XNV Chain:A ((38-382)) | ----SFKCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKS-LGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -356584 for 2104 contacts (-169.5/contact) +
2D Compatibility (PS) -29262 + (NN) -11476 + (LL) 1072
1D Compatibility (HY) -25200 + (ID) 2800
Total energy: -424250.0 ( -201.64 by residue)
QMean score : 0.358
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