Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFVASERKMRAHQVLTFLLLFVITSVASENASTSRGCGLD--LLP-QYVSLCDLDAIWGIVVEAVAGAGALITLLLMLILLV--RLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLV-RHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLT---------VLRDTRPACAYEPMDFVMALIYDMVLLVVTLGLALFT--LCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLLPALQENTPNYFDTSQPRMRETAFEEDVQLPRAYMENKAFSMDEHNAALRTAGFPNGSLGKRPSGSLGKRPSAPFRSNVYQPTEMAVVLNGGTIPTAPPSHTGRHLW |
| 4OR2 Chain:A ((93-341)) | --------------------------AAEQLKTTRNAYIQKYLIPVRYLEWSNIESIIAI---AFSCLGILVTLFVTLIFVLYRDTPVVKSSSRE----LCYIILAGIFLGYVCPFTLIAKPTTTSCYLQRLLVGLSSAMCYSALVTKTNRIARILARKPRFMSAWAQVIIASILISVQLTLVVTLIIMEPPMPILSYPSIKEVYLICNTSNLGVVAPLGYNGLLIMSCTYYAFKTRNVPANFNEAK----YIAFTMYTTCIIWLAFVPIYFGSNYKIITTCFAVSLSVTVALGCMFTPKMYIIIAKPE--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197375 for 1518 contacts (-130.0/contact) +
2D Compatibility (PS) -23708 + (NN) -16280 + (LL) 9768
1D Compatibility (HY) -25600 + (ID) 2900
Total energy: -256095.0 ( -168.71 by residue)
QMean score : 0.291
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