Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLINSTDYLINASTLVRNS--TQFLAPASKMIIALSLYISSI------IGTITNGLYLW-VLRFKMKQTVNTLLFFHLILSYFISTMILPFMATSQLQDNHWNFGTALCKVFNGTLSLGMFTSVFFLSAIGLDRYLLTLHPVWSQQHRTPRWASSIVLGVWISAAALSIPYLIFRETHHDRKGKVTCQNNYAVSTNWESKEMQASRQWIHVACFISRFLLGFLLPFFIIIFCY-----ERVASKVKERSLFKSSKPFKVMMTAIISFFVCWMPYHIHQ---GLLLTTNQSLLLELTLILTVLTTSFNTIFSPTLYLFVGENFKKVFKKSILALFESTFSEDSSVERTQT |
| 4RWA Chain:A ((103-404)) | -----------------RNAYIQKYLGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMET-WPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRP-RDGAVVCMLQFP-SPSW---------YWDTVT-KICVFLFAFVVPILIITVCYGLMLL---GSKEKDRSLRRIT---RMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207627 for 1999 contacts (-103.9/contact) +
2D Compatibility (PS) -27955 + (NN) -2801 + (LL) 4220
1D Compatibility (HY) -27200 + (ID) 4550
Total energy: -265913.0 ( -133.02 by residue)
QMean score : 0.329
|
|
|