Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGTYNTCGSSDLTWPPAIKLGF-YAYLGVLLVLGLLLNSLALWVFCCRMQQWTETRIYMTNLAVADLCLLCTLPFVLHSLRDTSD--TPLCQLSQGIYLTNRYMSISLVTAIAVDRYVAVRHPLRARGLRSPRQAAAVCAVLWVL-VIGSLVARWLLGIQEGGFCFRSTRH----------NFNSMAFPLLGFYLPLAVVVFCSLKVVTALAQ------------------------RPPTD----------------------VGQAEATRKAARMVWANLLVFVVCFLPLHVGL---TVRLAVGWNACALLETIRRALYITSKLSDANCCLDAICYYYMAKEFQEASALAVAPSAKAHKSQDSLCVTLA |
| 4MBS Chain:A ((36-359)) | ---------------PPLYSLVFIFGFVGNMLVILILINYK-------RLKSMTD--IYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194617 for 1894 contacts (-102.8/contact) +
2D Compatibility (PS) -27197 + (NN) -13840 + (LL) 2496
1D Compatibility (HY) -33600 + (ID) 3900
Total energy: -270658.0 ( -142.90 by residue)
QMean score : 0.361
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