Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRAPGALLARMSRLLLLLLLKVSASSALGVAPASRNETCLGESCAPTVIQRRGRDAWGPGNSARDVLRARAPREEQGAAFLAGPSWDLPAAPGRDPAAGRGAEASAAGPPGPPTRPPGPWRWKGARGQEPSETLGRGNPTALQLFLQISEEEEKGPRGAGISGRSQEQSVKTVPGASDLFYWPRRAGKLQGSHHKPLSKTANGLAGHEGWTIALPGRALAQNGSLGEGIHEPGGPRRGNST-NRRVRLKNPFYPLTQESYGAYAV------MCLSVVIFGTGIIGNLAVMCIVCHNYYMRSISNSLLANLAFWDFLIIFFCLPLVIFHELTKKWLLEDFSCKIVPYIEVASLGVTTFTLCALCIDRFRAATNVQMYYEMIENCSSTTAKLAVIWVGALLLALPEVV--LRQLSKEDLG----------FSGRAPA-ERCIIKISPDLPDTIYVLALTYDSARLWWY----FGCYFCLPTLFTITCSLVTARKIRKAEKACTRGNKRQIQLESQMNCTVVALTILYGFCIIPENICNIVTAYMATGVSQQTMDLLNIISQFLLFFKSCVTPVLLFCLCKPFSRAFMECCCCCCEECIQKSSTVTSDDNDNEYTTELELSPFSTIRREMSTFASVGTHC |
3SN6 Chain:R ((121-490)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GETGVAGFTNSLR---MLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA----EVWVVGMGIVMSLIVLAI-VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYR---QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGR-------------------------CLKEHKALKTLGIIMGT--------FTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIG----YVNSGFNP-LIYCRSPDFRIAFQELLC------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193225 for 2196 contacts (-88.0/contact) +
2D Compatibility (PS) -31984 + (NN) 2656 + (LL) 15516
1D Compatibility (HY) -23600 + (ID) 4000
Total energy: -234637.0 ( -106.85 by residue)
QMean score : 0.194
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