Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLLDLCCSDILRSAICFPFVFNSVKNGSTWTYGTLTCKVIAFLGVLSCFHTAFMLFCISVTRYLAIAHHRFYTKRLTFWTCLAVICMVWTLSVAMAFP-PVLDVGTYSFIREEDQCTFQHRSFRANDSLGFMLLLALILLATQLVYLKLIFF--VHDRRKMKPVQFVAAVSQNWTFHGPGASGQAAANWLAGF-------------GRGPTPPTLLGIRQNANTTGRRR-------------LLVLDEFKMEK---------------------------RISRMFYIMTFLFLTLWGPYLVACYWRVFAR--GPVVPGGFLTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLYCRKSRLPREPYCVI |
| 4IB4 Chain:A ((38-407)) | ----------------------------MVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIWHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIET---NPNNITCVLTKERFG-----DFMLFGSLAAFFTPLAIMIVTYFLTIHALQKK-----AADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK----------------KDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFNKTFRDAFGRYITCNYR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285755 for 2039 contacts (-140.1/contact) +
2D Compatibility (PS) -29670 + (NN) -4560 + (LL) 3776
1D Compatibility (HY) -23200 + (ID) 3850
Total energy: -343259.0 ( -168.35 by residue)
QMean score : 0.235
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