Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNSSSTSTSSTTGGSLLLLCEEEESWAGRRIPVSLLYSGLAIGGTLANGMVIYLVSSFRKLQTTSNAFIVNGCAADLSVCALWMPQEAVLGLLPTGSAEPPADWDGAGGSYRLLRGGLLGLGLTVSLLSHCLVALNRYLLITRAPATYQALYQRRHTAGMLALSWALALGLVLLLPPWAPRPG--AAPPR------VHYPALLAAAALLAQTALLLHCYLGIVRRVRVSVKRVSVLNFHLLHQL---------------------PGCAA-AAA-------A-FP----GAQHA----P---------------------------------------GPGGAAHP-----------------------AQAQP----------LPPALHPRRAQRRLSGLSVLLLCCVFLLATQPLVWVSLASGFSLP-VPWGVQAASWLLCCALSALNPLLYTWRNEEFRRSVRSVLPGVGDAAAAAVAATAVPAVSQAQLGTRAAGQHW |
| 3RZE Chain:A ((10-443)) | --------------------------------PLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL--------MSKWSL-GRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQ-PLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNH---RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHI------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176579 for 2081 contacts (-84.9/contact) +
2D Compatibility (PS) -32395 + (NN) -24079 + (LL) 4276
1D Compatibility (HY) -25200 + (ID) 3300
Total energy: -257277.0 ( -123.63 by residue)
QMean score : 0.246
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