Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESNQTWITEVILLGFQVDPALELFLFGFFLLFYSLTLMGNGIILGLIYLDSRLHTPMYVFLSHLAIVDMSYASSTVPKMLANLVMHKKVISFAPCILQTFLYLAFAITECLILVMMCYDRYVAICHPLQYT-LIMNWRVCTVLASTCWIFSFLLALVHITLILRLPFCGPQKINHFFCQIMSVFKLAC--AD-TRLNQVVLFAGSAFILVGPLCLVLVSYLHILVAILR----IQS----GEGRR----KAFSTCSSHLCVVGLFFGSAIVMYM-------APKSSHSQERRKILSLFYSLFNPILNPLIYSLRNAEVKGALKRVLWKQRSM |
| 3RFM Chain:A ((19-303)) | -----------------------------------LAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIP--FAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIA-ICWVLSFAIGL---TPMLGWNNCGQP--------GCGEGQVACLFEDVVPMNYMVYFNFFACVLV-PLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290150 for 1903 contacts (-152.5/contact) +
2D Compatibility (PS) -25789 + (NN) -5495 + (LL) 5000
1D Compatibility (HY) -26000 + (ID) 3700
Total energy: -346134.0 ( -181.89 by residue)
QMean score : 0.338
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