Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANITRMANHTGRLDFILMGLFRQSKHPALLSVVIFVVFLKALSGNAVLILLIHCDAHLHSPMYFFISQLSLMDMAYISVTVPKMLLDQVMGVNKVSAPECGMQMFL---YLTLAGSEFFLLATMAYDRYVAICHPLRYPVLMNHRVCLFLASGCWFLGSVDGFMLTPITMSFPFC---RSWEIHHFFCEVPAVTILSCSDTSLYETLMYLCCVLMLLIPVTIISSSYLLILLTVHR-MNSAEGRKKAFAT------CSSHLTVVILFYGAA--------VYTYMLPSSYHTPEKDMMVSVFYTILTPVLNPLIYSLRNKDVMGALKKMLTVRFVL |
| 2YDO Chain:A ((20-303)) | -----------------------------------------AILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPF-----AIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIG--LTPM-LGWNNCGQPKEGKAHSQGCGEGQVACLF-EDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES------TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224828 for 1893 contacts (-118.8/contact) +
2D Compatibility (PS) -25441 + (NN) -11221 + (LL) 5684
1D Compatibility (HY) -24800 + (ID) 3050
Total energy: -283656.0 ( -149.84 by residue)
QMean score : 0.214
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