Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLNKSASTFQLTGFPGMEKAHHWIFIPLLAAYISILLGNGTLLFLIRNDHNLHEPMYYFLAMLAATDLGVTLTTMPTVLGVLWLDHREIGHGACFSQAYFIHTLSVMESGVLLAMAYDCFITIRSPLRYTSILTNTQVMK-IGVRVLTRAGLSIMPIVVRLHWF----PYCRSHVLSHAFCLHQDVIKLACADITFNRLYPVVVLFAMVLLDFLIIFFSYILILKTVMGIGSGGERAKALNTCVSHICCILVFYV-----------TVVCLTFIHRFGKHVP---HVVHITMSYIHFLFPPFMNPFIYSIKTKQIQSGILRLFSLPHSRA |
| 3VGA Chain:A ((14-297)) | -----------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS-TGFCAACHG-CLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPM---LGWNNCGQ--SQGCGEGQVACLFEDVVPMN-YMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSV----VNPFIYAYRIREFRQTFRKIIRSHVL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -236281 for 1862 contacts (-126.9/contact) +
2D Compatibility (PS) -25388 + (NN) -5409 + (LL) 2612
1D Compatibility (HY) -16400 + (ID) 3600
Total energy: -284466.0 ( -152.77 by residue)
QMean score : 0.236
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