Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETSLSSQCFPMSVLNNTIAEPLIFLLMGIPGLKATQYWISIPFCLLYVVAVSGNSMILFVVLCERSLHKPMYYFLSMLSATDLSLSLCTLSTTLGVFWFEAREINLNACIAQMFFLHGFTFMESGVL----------LAMAFDRFVAICYPLRYTTILTNARIAKIGMSMLIRNVAVMLPVMLFVKRLSFCSSMVLSHSYCYHVDLIQLSCTDNRINSILGLFALLSTTGFDCPCILLSYILIIRSVLSIASSEERR------KAFNTCTSHISA-------VSIFYLPLISLSLVHRYGHSAPPFVHIIMANVFLLI-----PPVLNPIIYSVKIKQIQKAIIKVLIQKHSKSNHQLFLIRDKAIYE |
| 2YDO Chain:A ((18-314)) | -------------------------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--------ISTGFCAA----CHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN---CGQPKEGKAHSQGCGEGQVACL---FEDVVPMNYMVYFNFFA--CVLVPLLLMLGVYLRIFLAARRQLKQMES----TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI-IRSHVLRQQEPFKAAAAENLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200050 for 1827 contacts (-109.5/contact) +
2D Compatibility (PS) -26103 + (NN) -3988 + (LL) 6128
1D Compatibility (HY) -29200 + (ID) 3300
Total energy: -256513.0 ( -140.40 by residue)
QMean score : 0.199
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