Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQVTNTTQEGIYFILTDIPGFEASHIWISIPVCCLYTISIMGNTTILTVIRTEPSVHQRMYLFLSMLALTDLGLTLTTLPTVMQLLWFNVRRISSEAC--FAQFFFLHGFSFMESSVLLAMSVDCYVAICCPLHYASILTNEVIGRTGLAIICCCVLAVLPSLFLLKRLPFCHSHLLSRSYCLHQDMIRLVCADIRLNSWYGFALALLIIIVDPLLIVI-----SYTLILKNILGTATWAERLRAL-------NNCLSHILAVLVL-YIPMVGVSMTHRFAKHASPLVHVIMANIYLLAPPVMNPIIYSVKNKQIQWGMLNFLSLKNMHSR |
| 2YCX Chain:A ((26-283)) | ----------------------------------------VAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIET--LCVIAIDRYLAITSPFRYQSLMT-----RARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDP---GCCDFVTNRAYAIASSIISFYI-PLLIMIFVALRVYREAKEQIRKIDRASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFK------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -239401 for 1727 contacts (-138.6/contact) +
2D Compatibility (PS) -24588 + (NN) -7218 + (LL) 4932
1D Compatibility (HY) -19200 + (ID) 3150
Total energy: -288625.0 ( -167.13 by residue)
QMean score : 0.165
|
|
|