Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTLPTQIAPNSSTSMAPTFLLVGMPGLSGAPSWWTLPLIAVYLLSALGNGTILWIIALQPALHRPMHFFLFLLSVSDIGLVTALMPTLLGIALAGAHTVPASACLLQMVFIHVFSVMESSVLLAMSIDRALAICRPLHYPALLTNGVISKISLAISFRCLGLHLPLPFLLAYMPYCLPQVLTHSYCLHPDVARLACPEAWGAA---------YSLFVVLSAMGLDPLLIFFSYGL-----IGKVLQGVESR---EDRWKAGQTCAAHLSAVL-----LFYIPMILLALINHPEL--PITQHTHTLLSYVHFLLP---PLINPILYSVKMKE--------IRKRILNRLQPRKVGGAQ |
| 4UHR Chain:A ((6-319)) | ------------------------------SSVYITVEL-AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIP--FAIAISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVT-GTRAKGIIAICW-------VLSFAIGLTP-----MLGWNNCGQPKEGKAGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-HAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFKAAAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224808 for 1940 contacts (-115.9/contact) +
2D Compatibility (PS) -28286 + (NN) -11725 + (LL) 2628
1D Compatibility (HY) -24000 + (ID) 3950
Total energy: -290141.0 ( -149.56 by residue)
QMean score : 0.362
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