Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALPITNGTLFMPFVLTFIGIPGFESVQCWIGIPFCATYVIALIGNSLLLIIIKSEPSLHEPMYIFLATLGATDISLSTSIVPKMLDIFWFHLPEIYFDA-CLFQMWLIHTFQGIESGVLLAMALDRCVAICYP-----LRRAIVFTRQLVTYIVVGVTLRPAIL----VIPCLLLIKCHLKLYRTKLI-YHTYCERVALVKLATEDVYINKVYGILGAFIV---------------------------GGLDFIFITLSYIQIFITVFHLPLKEARLKVFNTCIPHIYVFFQFYL---LAFFFIFYSQIWILYPIIC--------TYHLVQSLPTGPTIPQPLYLWVKDQTH--- |
| 4XNV Chain:A ((38-382)) | ----------SFKCALTKTGF-----QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTL-PALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218971 for 2041 contacts (-107.3/contact) +
2D Compatibility (PS) -28794 + (NN) 3230 + (LL) 708
1D Compatibility (HY) -20000 + (ID) 2550
Total energy: -266377.0 ( -130.51 by residue)
QMean score : 0.044
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