Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFYHNKSIFHPVTFFLIGIPGLEDFHMWISGPFCSVYLVALL---GNATILLVIKVEQTLREPMFYFLAILSTIDLALSTTSVPRMLGIFWFDAHEINYGACVAQMFLIHAFTGMEA-------EVLLAMAFDRYVAVCAPLHYATILT-SQVLVGISMCIVIRPVLLTLPMVYLIYRLPFCQAHIIAHSYCEHMGIAKLSCGNIRINGIYGLF--VVSFFVLNLVLIGIS-YVY------ILRAVFRLPSH---DAQLKALSTCGAHVGVICVFYIPSVFSFLTHRFGHQ-IPGYIHILVANLYLIIPPSLNPIIYGVRTKQIRE--RVLYVFTKK |
| 2Y00 Chain:A ((8-300)) | -------------------------QQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP-------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA---LKCYQDP------GCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ---------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAF-NWLGYANSAMNPIIY-CRSPDFRKAFKRLLA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204478 for 1742 contacts (-117.4/contact) +
2D Compatibility (PS) -25305 + (NN) -2545 + (LL) 4864
1D Compatibility (HY) -23600 + (ID) 3550
Total energy: -254614.0 ( -146.16 by residue)
QMean score : 0.231
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