Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKENSSMVTEFIFMGITQDPQMEIIFFVVFLIVYLVNVVGNIGMIILITTDTQLHTPMYFFLCNLSFVDLGYSSAIAPRMLADFLTNHKVISFSSCATQFAFFVGFVDAECYVLAAMAYGRFVAICRPLHYSTFMSKQVCLALMLGSYLAGLVSLVAHTTLTFSLSYCGSNIINHFFCEIPPLLALSCSDTYISEIL-LFSLCGFIEFSTILIIFISYTFILVAIIRMRS-----------AEGRLKAFSTCGSHLTGITLFYGTVMFMYLRPTSSY---SLDQD---KWASVFYTVIIPMLNPLIYSLRNKDVKAAFKKLIGKKSQ |
| 2KS9 Chain:A ((35-323)) | --------------------------WAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYS-T--T--ETMPSRVVCMIEWPEH----PNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260391 for 2129 contacts (-122.3/contact) +
2D Compatibility (PS) -27344 + (NN) -4918 + (LL) 2904
1D Compatibility (HY) -24000 + (ID) 2400
Total energy: -316149.0 ( -148.50 by residue)
QMean score : 0.295
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