Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMGQNQTSISDFLLLGLPIQPEQQNLCYALFLAMYLTTLLGNLLIIVLIRLDSHLHTPVYLFLSNLSFSDLCFSSVTMPKLLQNMQNQDPSIPYADCLTQMYFFLYFSDLESFLLVAMAYDRYVAICFPMHYTAICFLLHYTAIMSPMLCLSVVALSWVLTTFHAMLHTLLMARLCFCADNVIPHFFCDMSALLKLAC--SDTRVNEWVIFIMGGLILVIPFLLILGSYARIVSSILK---------VPSSKG----------------ICKAFSTCGSHLSVVSLFYGTVIGLYLCPSANSSTLKDTVMAMMYTVVTPMLTPFIYSLRNRDMKGALERVI--CKRKNPFLL |
| 3RFM Chain:A ((14-305)) | -------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITISTGFCAAC--HGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIP---------LRYNGLVTGTRAAGIIAICWVLS-FAIGLTPMLGWNNCGQP----------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCF------TFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241465 for 1925 contacts (-125.4/contact) +
2D Compatibility (PS) -25777 + (NN) -413 + (LL) 4168
1D Compatibility (HY) -28400 + (ID) 3250
Total energy: -295137.0 ( -153.32 by residue)
QMean score : 0.332
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