Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDNITSIREFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFS--TFAVTECL-LLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKLACADTHINENMVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQRKAFRTCFSH---LCVIGLVYGT--------AIIMYVGPRYGNPKEQKKYLLL-FHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL |
| 4GBR Chain:A ((13-286)) | ------------------------------SLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL--TKTWTF-GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTS------FLPIQMHWYRATHQEAINCYA--EETCCDFFTNQAYAIASSIVSFYVPLVIMVFVY----SRVFQEAKRQLQ-KIDKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLI-YCRSPDFRIAFQELLCL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203140 for 1861 contacts (-109.2/contact) +
2D Compatibility (PS) -26140 + (NN) -8500 + (LL) 4836
1D Compatibility (HY) -22800 + (ID) 3350
Total energy: -259094.0 ( -139.22 by residue)
QMean score : 0.199
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