Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIDNQTWVREFILLGLSSDWCTQISLFSLFLVTYLMTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLAL----GGIEFVLLAVMAYDRHVAVSDRLRYSAIMHGGLCARLAITSWVSGSINSLVQTAITFQLPMCTNKFIDHISCELLAVVRLACVDTSSNEAAIMVSSIVLLMTPFCLVLLSYIRII----STILKIQSREGRK---------KAFHTCASHLTVVALCYGTTIFTYIQPHSGPSVLQEKLISVF--YAIVMPLLNPVIYSLRNKEVKGAWHKLLEKFSGLTSKLGT |
| 2Y04 Chain:A ((6-299)) | ----------------LSQQWEAGMSLLMALVV--LLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIE--TLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVW---AISALVSF-----LPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214892 for 1882 contacts (-114.2/contact) +
2D Compatibility (PS) -26844 + (NN) -8863 + (LL) 4488
1D Compatibility (HY) -28400 + (ID) 3650
Total energy: -278161.0 ( -147.80 by residue)
QMean score : 0.250
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