Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MARENSTFNSDFILLGIFNHSPTHTFLFFLVLAIFSVAFMGNSVMVLLIYLDTQLHTPMYLLLSQLSLMDLMLICTTVPKMAFNYLSGSKSISMAGCATQIFFYTSLLGSECFL--LAVMAYDRYTAICHPLRYTNLMSPKICGLM-TAFSWILGSTDGIIDVVATFSFSYCGSREIAHFFCDFPSLLILSCS-------DTSIFEKILFICCIVMIVFPVAIIIASYARVILAVIHMGSGEGRRKAFTTCSSHLLVVGM--------------YYGAALFMYIRPTSDRSPTQDKMVSVFYTILTPMLNPLIYSLRNKEVTRAFMKILGKGKSGE |
| 3DQB Chain:A ((43-326)) | -------------------------YMFLLIMLGFPINFLTLYVTVQ----HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFAT--LGGEIALWSLVVLAIERYVVVCKPM--SNFRFGENHAIMGVAFTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ--QESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217599 for 1939 contacts (-112.2/contact) +
2D Compatibility (PS) -26759 + (NN) -9782 + (LL) 3176
1D Compatibility (HY) -24800 + (ID) 3300
Total energy: -279064.0 ( -143.92 by residue)
QMean score : 0.334
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