Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMSFFLAGLTFIDII-----YSSSISPRLISDLFFGNNSISFQSFMAQLFIEHLFGGSEVFL--LLVMAYDRYVAICKPL--------HYLV-IMRQWVCVLLLVVSWVGGFLQSVFQLSIIYGLP-FCGPNVIDHFFCDMYPLLKLACTDTHVIGLLVVANGGLSCTIAFLLLLISYGVILHSLKKLSQKGRQKAHS-TCSSHITVVVFFFVPCIFMCARPARTFS-------------IDKSVSVFYTVITPMLNPLIYTLRNSEMTSAMKKL |
4ZWJ Chain:A ((204-477)) | ---------------------------MFLLIVLGFPINFLTLYVTVQ-HKKLRTPLNYILLNLAVADLFMVLGGFTSTLYTSLHGYFVFGPTGCNLQGFFATL-------GGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPE-----GLQCSCG--------IDYYTLKPEVNNESFVIYMFVV-----HFTIPMIIIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQGSCFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220340 for 1769 contacts (-124.6/contact) +
2D Compatibility (PS) -24318 + (NN) -4854 + (LL) 3820
1D Compatibility (HY) -30800 + (ID) 3400
Total energy: -279892.0 ( -158.22 by residue)
QMean score : 0.243
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