Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVATNNVTEIIFVGFSQNWSEQRVISVMFLLMYTAVVLGNGLIVVTILASKVLTSPMYFFLSYLSFVEICYCSVMAPKLIFDSFIKRKVISLKGC-LTQMF-SLHFFGGTEAF-LLMVMAYDRYVAICKPLHYMAIMNQRMCGLLVRIAWGGGLLHSVGQTFLIFQLPFCGPNIMDHYFCDVHPVL-----ELACADTFFISLLIITNGG---SISVVSFFV-LMASYLIILHFLRSHN------LEGQHKALSTCASHVTVVDLFFIPCSLVYIRPCVT--LPADKIVAVFYTV--VTPLLNPVIYSFRNAEVKNAMRRFIGGKVI |
| 2Y00 Chain:A ((6-300)) | --------------LSQQWEAG--MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP---FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSF--------LP-----IMMHWWRDEDPQALKCYQDPGCCD-------FVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -231373 for 1859 contacts (-124.5/contact) +
2D Compatibility (PS) -26214 + (NN) -4537 + (LL) 3904
1D Compatibility (HY) -28400 + (ID) 3700
Total energy: -290320.0 ( -156.17 by residue)
QMean score : 0.234
|
|
|