Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MDQYNHSSLAEFVFLGFASVGYVRGWLFVLLLLAYLFTICGNMLIFSVIRLDAALHTPMYHFVSVLSFLELWYTATTIPKMLSNILSEKKTISFAGCLLQTYFFHSLGASECYLLTAMAYDRYLAICRPLHYPIIMTTTLCAKMAAACWTCGF---LCPI---------SEVILASQLPFCAYNEIQHIFCDFPPLLSLACKDTSANILVDFAINAFIILITFFFIMISYARI-IGAVLKIKTASGRKKAFST------CASHLAVVLIFFG------SII--FMYVRLKKSYSLTLDRTLAIVYSVLTPMVNPIIYSLRNKEIIKAIKRTIFQKGDKASLAHL 2YDO Chain:A ((18-303)) -----------------------------------VLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIA--ISTGFCAACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQ--GCGEGQVACLFEDVVPM----------NYMVYFNFFA-CVLVPLLLMLGVYLRIFLAARRQLKQMES------TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK

General information: TITO was launched using: RESULT: Template: 2YDO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -233783 for 1845 contacts (-126.7/contact) + 2D Compatibility (PS) -25301 + (NN) -10526 + (LL) 4660 1D Compatibility (HY) -24800 + (ID) 3800 Total energy: -293550.0 ( -159.11 by residue) QMean score : 0.342

(partial model without unconserved sides chains): PDB file : Tito_2YDO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YDO-query.scw PDB file : Tito_Scwrl_2YDO.pdb: