Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQHNLTVLTEFILMELTRRPELQIPLFGVFLVIYLITVVGNLTMIILTKLDSHLHTPMYFSIRHLAFVDLGNSTVICPKVLANFVVDRNTISYYACAAQL---AFFLMFIISEFFILSAMAYDRYVAICNPLLYYVIMSQRLCHVLVGIQYLYSTFQALMFTIKIFTL---------TFCGSNVISHFYCDDVPLLPMLCSNAQEIELLSILFSVFN-LISSFLIVLVSYMLILLA----ICQMHSAE-GRKKAFST------CGSHLTVVVVFYGSLLFMYMQPNSTHFFDTDKMASVFYTLVIPML--------NPLIYSLRNEEVKNAFYKLFEN
3VG9 Chain:A ((12-305))-----------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP-----FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLS------FAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYM------------VYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS


General information:
TITO was launched using:
RESULT:

Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -245345 for 1802 contacts (-136.2/contact) +
2D Compatibility (PS) -25651 + (NN) -6639 + (LL) 5036
1D Compatibility (HY) -26400 + (ID) 3500
Total energy: -302499.0 ( -167.87 by residue)
QMean score : 0.188

(partial model without unconserved sides chains):
PDB file : Tito_3VG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VG9-query.scw
PDB file : Tito_Scwrl_3VG9.pdb: