Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGQHNLTVLTEFILMELTRRPELQIPLFGVFLVIYLITVVGNLTMIILTKLDSHLHTPMYFSIRHLAFVDLGNSTVICPKVLANFVVDRNTISYYACAAQL---AFFLMFIISEFFILSAMAYDRYVAICNPLLYYVIMSQRLCHVLVGIQYLYSTFQALMFTIKIFTL---------TFCGSNVISHFYCDDVPLLPMLCSNAQEIELLSILFSVFN-LISSFLIVLVSYMLILLA----ICQMHSAE-GRKKAFST------CGSHLTVVVVFYGSLLFMYMQPNSTHFFDTDKMASVFYTLVIPML--------NPLIYSLRNEEVKNAFYKLFEN |
3VG9 Chain:A ((12-305)) | -----------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIP-----FAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLS------FAIGLTPMLGWNNCGQSQGCGEGQVACLFEDVVPMNYM------------VYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -245345 for 1802 contacts (-136.2/contact) +
2D Compatibility (PS) -25651 + (NN) -6639 + (LL) 5036
1D Compatibility (HY) -26400 + (ID) 3500
Total energy: -302499.0 ( -167.87 by residue)
QMean score : 0.188
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