Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNASNDSQSEDCETRQWLPPGESPAISSVMFSAGVLGNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVTELVFTDLLGTCLISPVVLASYARNQTLVALAPESRACTYFAFAMTFFSLATMLMLFAMALERYLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLD-YGQYVQYC-----PGTWCFIRHGRTAYL-QLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSL---------------------------G-----------SGR----------------G-------------------------------------------------------------GP-----GA-------------RRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSS--RKEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
| 2RH1 Chain:A ((40-477)) | --------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKF-----------ERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-MKMWTF---GNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249912 for 2167 contacts (-115.3/contact) +
2D Compatibility (PS) -30763 + (NN) -11836 + (LL) 2872
1D Compatibility (HY) -18800 + (ID) 2600
Total energy: -311039.0 ( -143.53 by residue)
QMean score : 0.386
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