Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVIKSIFTFVLIVEFIIGNLGNSFIALVNCIDWVKGRKISSVDRILTALAISRISLVWLIFGSWCVSVFFPALFATEKMFRMLTNIWTVINHFSVWLATGLGTFYFLKIANFSNSIFLYLKWRVKKVVLVLLLVTSVFLFLNIALINIHINASINGYRRNKTCS-SDS---SN--FTRFSSLIVLTSTVFIFIPFTLSLAMFLLLIFSMWKHRKKMQHTVKISGDASTKAHRG-VKSVITFFLLYAIFSLSFFISVWTSERLEENL-IILSQVMGMAYPSCHSCVLILGNKKLRQASLSVLLWLRYMFKDGEPSGHKEFRESS |
| 1U19 Chain:A ((42-328)) | -------MLAAYMFLLIMLGFPINFLTLYVTVQHK---KLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVC---KPMSNF-RF-GENHAIMGVAFTWVMALACAAPPLVGWSR--YIPEGMQCSCGIDYYTPHEETNNESF--VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATT-QKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217819 for 2201 contacts (-99.0/contact) +
2D Compatibility (PS) -27094 + (NN) 4385 + (LL) 976
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -242802.0 ( -110.31 by residue)
QMean score : 0.194
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