Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLGRCFPPDTKEKQQLRMTKLCDPAESELSPFLITLILAVLLAEYLIGIIANGFIMAIHAAEWVQNKAVSTSGRILVFLSVSRIALQSLMMLEITISSTSLSFYSEDAVYYAFKISFIFLNFCSLWFAAWLSFFYFVKIANFSYPLFLKLRWRITGLIPWLLWLSVFISFSHSMFC-INICTVYCNNSFPIHSSNSTK-----KTYLSEINVVGL-AFFFNLGIVTPLIMFILTATLLILSLKRHTLHMGSNAT-----------------------------------------------------------------------------------------------------------------------------------------------------GSNDPSMEAHMGAIKAISYFLILYIFNAVALFIY-LSNMF-----DINSLWNNLCQIIMAAYPASHSILLIQDNPGLRRAWKRLQLRLHLYPKEWTL |
| 3EML Chain:A ((20-472)) | --------------------------------GSSVYITVELAIAVLAILGNVLVCWAVWLNS---NLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIR---IPLRYN-GLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCG----Q----SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -262367 for 2116 contacts (-124.0/contact) +
2D Compatibility (PS) -29336 + (NN) -11845 + (LL) 2704
1D Compatibility (HY) -18000 + (ID) 1750
Total energy: -320594.0 ( -151.51 by residue)
QMean score : 0.326
|
|
|