Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITFLPIIFSILVVVTFVIGNFANGFIALVNSTEWVKRQKISFADQIVTALAVSRVGLLWVL-LLNWYSTVLNPA-FCSVELRTTAYNIWAVTGHFSNWPATSLSIFYLLKIANFSNLIFLRLKRRVKSVILVVLLGPLLFLACHLFVVNMNQIVWTKEYEGNMTWKIKLR---RAMYLSDTTVTMLANLVPFTVTLISFLLLVCSLCKHLKKMQLHGK-------GSQDPSTKVHIKVLQTVIS----FFLLRAIYFVSVIISVWSFKNLENKPVFMFCQAIGFSCSSAHPFILIWGNKKLKQTYLSVLWQMRY |
| 2Z73 Chain:A ((33-333)) | ----VYYSLGIFIGICGIIGCGGNGIVIYLFTKTK---SLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIG---RPMAAS-KKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAY-TLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197753 for 2281 contacts (-86.7/contact) +
2D Compatibility (PS) -28450 + (NN) -2917 + (LL) 1204
1D Compatibility (HY) -13200 + (ID) 1700
Total energy: -242816.0 ( -106.45 by residue)
QMean score : 0.244
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