Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------------------MMGLTEGVFLILSGTQFTLGILVNCFIELVNGSSW-------------FKTKRMSLSDFII--------------TTLALLRIILLC-----IILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATC-LGVLYCL--KIAS-FSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEA-----------------TRNVTEHFRKKRSEYY-LIHVLGTLWYLPPLIVSLASYSLLIFSLGRH--------TRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLL-----------YFLAFLIASFGNFLPK-TKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTF---VVMLRCESGHLKPGSKGPIFS--------- |
4XGC Chain:D ((5-457)) | DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNSLLLLGPRGSGKTTLINSVLADLLPNKSFGENTLIVHLDGNLHTDDRVALKSITVQMQLENAADGKVFGSFAENLAFLLQCLKSKSVIFILEEFDLFCAH-HNQTLLYNLFDVSQSAQAPICVLGVTCRLDVIELLEKRVKSRFSHRQVFLFP-SLRRFEDYVDLCRDLLSLPTGNSLLLAAEKIYNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQICKVLATQQARSTLQALHDFDISEAYLKNFLFRLVAHLRPQSPHITAEKMAAVGSQFEGDDKIELLCGLSVLELCLIIAIKHHSQIYDRDSFNFEIIYARFSKFAKVSTTMQAVERSIVLKAFEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -267902 for 2067 contacts (-129.6/contact) +
2D Compatibility (PS) -32631 + (NN) -6778 + (LL) 208
1D Compatibility (HY) -21600 + (ID) 2800
Total energy: -331503.0 ( -160.38 by residue)
QMean score : 0.268
|
|
|