Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTI-YFVSSNTERSVY-LSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLY-ITLSQASPFPELVTTRNNTSF--NI---SEG--IL-SLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQTEAHVGAMKLMV----YFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 1U19 Chain:A ((41-326)) | ------SMLAAYMFLLIMLGFPINFLTLYVTVQH---KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGY-FVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR--FG---ENHAIMGVAFTWVMALACAAPPLVGWSR-Y----IP-EGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESA-----TTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240195 for 2091 contacts (-114.9/contact) +
2D Compatibility (PS) -26778 + (NN) 4590 + (LL) 2164
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -267169.0 ( -127.77 by residue)
QMean score : 0.165
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