Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPP---INMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4G3F Chain:A ((62-313)) | ---------------------------------HQPRVGRGSFGEVHRMKDKQTG---FQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVR-EGPWVNIFMELLEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLHT-RRILHGDVKADNVLLSSDGSRAALCDFGHALCL----------DYIPGTETHMAPEVVMG-KPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-----------L----CLKIASEPPPIREIP-PSCAPLTAQ---AIQEGLRKEPVHRASAMELRRKVGKAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109590 for 1985 contacts (-55.2/contact) +
2D Compatibility (PS) -26371 + (NN) -21875 + (LL) 3964
1D Compatibility (HY) -10400 + (ID) 2900
Total energy: -167172.0 ( -84.22 by residue)
QMean score : 0.475
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