Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPF--MQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQE-KKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDE---SYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
| 4C8B Chain:A ((29-309)) | ---------------------------TIPYHKLADLRYLSRGASGTVSSARHAD---WRVQVAVKHLHIHTPL--LDSERKDVLREAEILHKARFSYILPILGICN-EPEFLGIVTEYMPNGSLNELLHRKTE--YPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNE-FHVKIADF--------------------GTIIYMPPENY------SIKHDIYSYAVITWEVLSRKQPFEDVTN-------------PLQIMYSVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82096 for 1849 contacts (-44.4/contact) +
2D Compatibility (PS) -27241 + (NN) -25102 + (LL) 3280
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -147059.0 ( -79.53 by residue)
QMean score : 0.467
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