Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDDATVLRKKGYIVGINLGKGSYAKVKSAYSERLKFNVAVKIIDRKKTP-TDFVERFLPREMDILATVNHGSIIKTYEIFETSDGRIYIIMELGVQGDLLEFIKC---------------Q--------------GA---------LHEDVARKMFRQLSSAVKYCHDLDIVHRDLKCENLLLDKD--FNIKLSDFGFSKRCLRDSNGRIILSKTFCGSAAYAAPEVLQSI--PYQPKVYDIWSLGVILYIMVCGSMPYDDSDIRKMLRIQKEHRVDF--PRSKNLTCECKDLIYRMLQPDVSQRLHIDEILSHSWLQPPKPKATSSASFKREGEGKYRAECKLDTKTGLRPDHRPDHKLGAKTQHRLLVVPENENRMEDRLAETSRAKDHHISGAEVGKAST |
| 3HKO Chain:A ((26-337)) | ---------KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ-KDVERI-KTEVRLMKKLHHPNIARLYEVYEDE-QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--------AGTPYFVAPEVLNTTNESYGPK-CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIYKMS--------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -150015 for 1969 contacts (-76.2/contact) +
2D Compatibility (PS) -27698 + (NN) -17426 + (LL) 5632
1D Compatibility (HY) -20800 + (ID) 4150
Total energy: -214457.0 ( -108.92 by residue)
QMean score : 0.449
|
|
|