Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVTSAVAPCMSYASGKASAPSGACCSGVRTLNAKASTPADRKAACNCLKNLAG--SGISMGNAASIPGKCGVSVSIPISTKTNCNNLH
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47692 for 645 contacts (-73.9/contact) +
2D Compatibility (PS) -9351 + (NN) -1484 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -69777.0 ( -108.18 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: