Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVANCGQVVSYLAPCISYAMGRVSAPGGGCCSGVRGLNAAAATPADRKTTCTCLKQQASGIGGIKPNLVAGIPGKCGVNIPYAISQGTDCSKVR
1AFH Chain:A ((1-93))
-AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71657 for 764 contacts (-93.8/contact) +
2D Compatibility (PS) -9168 + (NN) 1640 + (LL) 144
1D Compatibility (HY) -6400 + (ID) 2700
Total energy: -88141.0 ( -115.37 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: